Package: mapmixture 1.2.0

mapmixture: Spatial Visualisation of Admixture on a Projected Map

Visualise admixture as pie charts on a projected map, admixture as traditional structure barplots or facet barplots, and scatter plots from genotype principal components analysis. A 'shiny' app allows users to create admixture maps interactively. Jenkins TL (2024) <doi:10.1111/1755-0998.13943>.

Authors:Tom Jenkins [aut, cre, cph]

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mapmixture.pdf |mapmixture.html✨
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NEWS

# Install 'mapmixture' in R:
install.packages('mapmixture', repos = c('https://tom-jenkins.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/tom-jenkins/mapmixture/issues

On CRAN:

admixtureancestrymapmixturepopulation-structureshiny

5.61 score 42 stars 13 scripts 331 downloads 13 exports 58 dependencies

Last updated 11 days agofrom:1149e764af. Checks:8 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 06 2025
R-4.5-winOKFeb 06 2025
R-4.5-macOKFeb 06 2025
R-4.5-linuxOKFeb 06 2025
R-4.4-winOKFeb 06 2025
R-4.4-macOKFeb 06 2025
R-4.3-winOKFeb 06 2025
R-4.3-macOKFeb 06 2025

Exports:add_pie_chartsbuild_pie_chartcalc_default_bboxlaunch_mapmixturemapmixturemerge_coords_dataread_input_datascatter_plotstandardise_datastructure_plottransform_admix_datatransform_bboxtransform_df_coords

Dependencies:abindclassclassIntclicolorspacecpp11crayoncurlDBIdplyre1071fansifarvergenericsggplot2ggspatialgluegtablehmsisobandjpegKernSmoothlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigpngprettyunitsprogressproxypurrrR6RColorBrewerRcpprlangrnaturalearthdatarosms2scalessfstringistringrtibbletidyrtidyselectunitsutf8vctrsviridisLitewithrwk