Package: mapmixture 1.2.0

mapmixture: Spatial Visualisation of Admixture on a Projected Map

Visualise admixture as pie charts on a projected map, admixture as traditional structure barplots or facet barplots, and scatter plots from genotype principal components analysis. A 'shiny' app allows users to create admixture maps interactively. Jenkins TL (2024) <doi:10.1111/1755-0998.13943>.

Authors:Tom Jenkins [aut, cre, cph]

mapmixture_1.2.0.tar.gz
mapmixture_1.2.0.zip(r-4.7)mapmixture_1.2.0.zip(r-4.6)mapmixture_1.2.0.zip(r-4.5)
mapmixture_1.2.0.tgz(r-4.6-any)mapmixture_1.2.0.tgz(r-4.5-any)
mapmixture_1.2.0.tar.gz(r-4.7-any)mapmixture_1.2.0.tar.gz(r-4.6-any)
mapmixture_1.2.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
mapmixture/json (API)
NEWS

# Install 'mapmixture' in R:
install.packages('mapmixture', repos = c('https://tom-jenkins.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/tom-jenkins/mapmixture/issues

On CRAN:

Conda:

admixtureancestrymapmixturepopulation-structureshiny

4.91 score 46 stars 35 scripts 171 downloads 13 exports 52 dependencies

Last updated from:1149e764af. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK182
source / vignettesOK205
linux-release-x86_64OK174
macos-release-arm64OK185
macos-oldrel-arm64OK231
windows-develOK119
windows-releaseOK112
windows-oldrelOK115
wasm-releaseOK143

Exports:add_pie_chartsbuild_pie_chartcalc_default_bboxlaunch_mapmixturemapmixturemerge_coords_dataread_input_datascatter_plotstandardise_datastructure_plottransform_admix_datatransform_bboxtransform_df_coords

Dependencies:abindclassclassIntclicpp11crayoncurlDBIdplyre1071farvergenericsggplot2ggspatialgluegtablehmsisobandjpegKernSmoothlabelinglifecyclemagrittrMASSpillarpkgconfigpngprettyunitsprogressproxypurrrR6RColorBrewerRcpprlangrnaturalearthdatarosms2S7scalessfstringistringrtibbletidyrtidyselectunitsutf8vctrsviridisLitewithrwk